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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834148.1_cds_XP_016505495.1_18831
CDS Infomation

[gene=LOC107823373] [db_xref=GeneID:107823373] [protein=pectin acetylesterase 8-like] [protein_id=XP_016505495.1] [location=complement(join(72207..72296,72420..72565,72676..72781,72871..72948,73055..73108,73214..73274,73392..73516,73643..73729,73853..73932,74042..74171,74274..74356,74451..74584,74701..74702))] [gbkey=CDS]
Sequence

ATGATGAAATTGACCTTTCGGTTGGCTTTGCTAGCATGTCTAGCAGTAGTGTCTATAACT
ACTACTCTCGGCGCCGGAGATGATGGATTCTACGTCAACATAACAATAGTTCAAAAAGCG
ACTGCCAAAGGCGCAGTATGCCTCGATGGAAGTCCTCCAGCGTATCATCTGCATCCGGGA
CATGGTAGCGGGCTGTGCAGCTGGATTATCGTCTTGGATGCTGGCGGTTGGTGCAGCAGT
ATCCCAGATTGCCTTGATCGTTCAGCTAATTTCTCTGGTTCTTCCAAGTATATGGATCGC
TGGGCTTTTTTTGCTGGAATACTTTCTAATATTTCAGAAGAAAATCCAGAGTTTTACAAC
TGGAATAGGGTGAGGGTGAAGTATTGTGATGGTTCATCCTTCACTGGTGATGTTGAACAA
GTTGACCCCGACAATAAGCTGTATTTTAGAGGGTCAAGAATATTCAAAGCGATTATGGAA
GATTTATCGACCAAGGGAATGCAAAATGCTGAAAATGCAATCTTGAGCGGAAGTTCAGCA
GGAGGGTTGGCTACAATTTTAAACTGCGATAAGTTAAAATCCCTCTTGCCGAATGTTGCC
AGACTTAAATGTGTTGCAGATGCAGGGTTCTTCATAAATGGGAGGACAATCTCTGGTACT
TTGGATATTCAAGAGATGTATCAGAGAGTTGTTACTCTACATGGATCGGCTAAGAATTTG
CCTTCAGCTTGTACGTCTGCAATGGATCCAAGTCTGTGCTTTTTCCCCGAGAATGTCGTT
CCATATGTTCAAACTCCACTTTTTATAATCAATTCAGCCTATGACTCCTGGCAGATTAAT
AACACTTTGGTTCCCAAATACCTTGATCCTGAACTTGTCTGGGAGCAATGCAAGAAACAA
ATAAGTAACTGCACATTCAGCCAGCGTTTAATTATTCAAGCTTTTGGAGTGGAGTTTTTG
AAGGCATTTGAGGGACTAACCCCTTGTTTTACGAGGGGTTATTTCATCACGTCTTGCCAT
TCTCATGGTGCAATTCTGTCAACTAATTTCTGGTTCAGTCCTACCTCTCCAAGATTACTT
CATAAGACACTTGCGGAAGCTGTTGGGGATTGGTACTTTGATAGAGCAGGATTTCAACGT
ATAGATCCATACCCTTGTGCTAGAGATTGCAAGTGA

Peptide Sequence

PEP ID

XP_016505495.1
PEP Infomation

PREDICTED: pectin acetylesterase 8-like [Nicotiana tabacum]
Sequence

MMKLTFRLALLACLAVVSITTTLGAGDDGFYVNITIVQKATAKGAVCLDGSPPAYHLHPG
HGSGLCSWIIVLDAGGWCSSIPDCLDRSANFSGSSKYMDRWAFFAGILSNISEENPEFYN
WNRVRVKYCDGSSFTGDVEQVDPDNKLYFRGSRIFKAIMEDLSTKGMQNAENAILSGSSA
GGLATILNCDKLKSLLPNVARLKCVADAGFFINGRTISGTLDIQEMYQRVVTLHGSAKNL
PSACTSAMDPSLCFFPENVVPYVQTPLFIINSAYDSWQINNTLVPKYLDPELVWEQCKKQ
ISNCTFSQRLIIQAFGVEFLKAFEGLTPCFTRGYFITSCHSHGAILSTNFWFSPTSPRLL
HKTLAEAVGDWYFDRAGFQRIDPYPCARDCK

Transcript Sequence

Gene sequence data has not been registered.